Hello, welcome back. I am reaching the end of my GSoC journey (week 12)! In the last blog post, we validated our methods with PLINDER, which is a protein-ligand dataset. This week, on the other hand, we focused on the protein-protein dataset, PINDER, and checked whether we got the same tendency as …

Hello, welcome to blog post on the week 10 of my GSoC journey! From the last blog post, we completed the development of the implicit H-bond interaction class. However, it is not perfect. Before getting this method merged into the main ProLIF, we have to validate our method using the explicit H-bond …

Hi again, I am now in the middle of my GSoC journey. Now, we are going to have the main course: implicit hydrogen bond interactions.

In this blog post, you will know more about why calculating the implicit hydrogen bond interaction is important and how we design the algorithm of implicit hydrogen …