[The summary is generated by SciSpace.]
[The image is generated by Stable Diffusion XL 1.0.]

Summary of the Research Paper on SARS-CoV-2 Omicron Variants

• The study investigates the spike protein and hACE2 interface of SARS-CoV-2 omicron variants, focusing on hydrogen bond formation.
• It highlights …

Multiple protein conformations are used to accurately represent binding site structure and dynamics in ensemble docking or de novo drug design. Following conformational selection, these conformations are often generated through molecular dynamics (MD) simulations of the protein in the ligand-free …

This is a summary list for my publication and conference, which is updated manually.

Publication

2024

5. [protocol article, FASTEVALP] Yang, Y. Y., Ho, M. Y., Tai, C. H., Wu, R. M., Kuo, M. C., and …

[The summary is organized by GPT-4o.]

The project explores how quantum computing is revolutionizing drug discovery by accelerating timelines and reducing costs in a traditionally lengthy and expensive process. It highlights quantum applications in key stages of drug development.

Key Points

1. Drug …

The Motor Disorder Society’s Unified Parkinson’s Disease Rating Scale (MDS-UPDRS) is commonly used to assess bradykinesia, a hallmark symptom of Parkinson’s disease (PD). However, it falls short in capturing the full variability of bradykinesia throughout the day outside of a clinical setting. To …

Under development.

Know more from reference…

Yang, Y. Y., Lai, Y. R., How, S. C., Lin, T. H., and Wang, S. S. S. (Jan. 2024). “Encapsulation with a complex of acidic/alkaline polysaccharide-whey protein isolate fibril bilayer microcapsules enhances the stability of β-carotene under …

Under development.

Know more from reference…

1. Wang, P. H., Yang, Y. Y., and Tseng, Y. J. “QSAR model of carcinogenicity based on data from GreenScreen hazard assessment.” American Chemical Society (ACS) Fall 2022. (virtual, 21–25 Aug.)
2. Wang, Y. K., Yang, Y. Y., Chang, C. Y., and Tseng, Y. J. …

Honors

Grants / Fellowship / Studentship

2. UKRI/BBSRC AIDD PhD Programme Scholarship (Sep. 2023 – Sep. 2027).
1. Undergraduate Research Fellowship, National Science and Technology Council, Taiwan (Jul 2020 – Feb. 2021).

Awards

4. NTU BEBI 2023 Best Master Thesis Award (Sep. 2023).
3. NTU-IBM …

Learning python and become an advanced programmer.

Programming developing tools

Learning from CMDM-workshop:

• Docker, Dockerfile, Docker compose.
• Pip, Venv, Pyenv, Virtualenv, Poetry.
• Git & GitHub.
• Type Hint & Mypy.
• Python style (pep8, flake8, isort, black), pydantic:
  • PEP8 (resource: 1, 2 …